BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F07SP1|AL428761
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1013 1760 0.0
>3x_Contig1013
Length = 5070
Score = 1760 bits (887), Expect = 0.0
Identities = 888/889 (99%)
Strand = Plus / Minus
Query: 1 gatccatcccatgccaatgccttgagaagaagaatctcatcttcttgaaagcttgcttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 gatccatcccatgccaatgccttgagaagaagaatctcatcttcttgaaagcttgcttcg 1441
Query: 61 ttggcgaaattccggcgaattcatcaggactcagggtaggaggtgtctcataccccaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 ttggcgaaattccggcgaattcatcaggactcagggtaggaggtgtctcataccccaagc 1381
Query: 121 ttcggttttcagatgttggagtaacgccactcaaggaactgaagagtctcttcaatttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 ttcggttttcagatgttggagtaacgccactcaaggaactgaagagtctcttcaatttag 1321
Query: 181 ctctttttgtaccactaggaagtccacccgaatcatgatgaacaatcgatgtcagtdacg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1320 ctctttttgtaccactaggaagtccacccgaatcatgatgaacaatcgatgtcagtaacg 1261
Query: 241 aagcagtagccataaggaaacgtttcaatgaagtttagaaggttctaaataggtagcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 aagcagtagccataaggaaacgtttcaatgaagtttagaaggttctaaataggtagcaaa 1201
Query: 301 aaattaagattaggttggaatcctcttgctattgaaccagcactgctgaatagtaaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 aaattaagattaggttggaatcctcttgctattgaaccagcactgctgaatagtaaaagg 1141
Query: 361 tacctaaatgagtgattggatttttcactctggggtcaatgattgttgtaagaagatgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 tacctaaatgagtgattggatttttcactctggggtcaatgattgttgtaagaagatgtg 1081
Query: 421 ctgataattcctctggtgtcaagaaataataagacacaaatcgaaaaccgtcttgcgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 ctgataattcctctggtgtcaagaaataataagacacaaatcgaaaaccgtcttgcgtca 1021
Query: 481 aaaaaatttaagcgaaaagcagtactagtacccgcctgtatataataatgtacggtaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 aaaaaatttaagcgaaaagcagtactagtacccgcctgtatataataatgtacggtaaca 961
Query: 541 ctgtataattattacatagcaaggttctacgttgaacgagtccttaaactgtcgttgtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ctgtataattattacatagcaaggttctacgttgaacgagtccttaaactgtcgttgtga 901
Query: 601 ctcagtgtttttgcgtcgcacgtcacattaatccaaagacaacagaagcaaaaaaaaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ctcagtgtttttgcgtcgcacgtcacattaatccaaagacaacagaagcaaaaaaaaaaa 841
Query: 661 ggcattctgcataacgggcactggtctattctggaatctccaaaatcaacttacctactg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ggcattctgcataacgggcactggtctattctggaatctccaaaatcaacttacctactg 781
Query: 721 tcttcctagattccaagtcttcagtagcctctttgtaatctttcaaaggataaaccttcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tcttcctagattccaagtcttcagtagcctctttgtaatctttcaaaggataaaccttcg 721
Query: 781 aaatagtgatcttcaattcacctgaatcgattaatctgatcaattcagaagagtaatgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aaatagtgatcttcaattcacctgaatcgattaatctgatcaattcagaagagtaatgtt 661
Query: 841 cccattcactaggatcggccacgtaggcgaacaattgaggtctcactag 889
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cccattcactaggatcggccacgtaggcgaacaattgaggtctcactag 612
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,753
Number of Sequences: 1807
Number of extensions: 11753
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)